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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789061.1_cds_XP_016494318.1_819
CDS Infomation

[gene=LOC107813547] [db_xref=GeneID:107813547] [protein=short integuments 2, mitochondrial-like] [protein_id=XP_016494318.1] [location=complement(join(327316..327570,327771..327988,328703..328799,329368..329438,329540..329681,330537..330614,331590..331694,331819..331974))] [gbkey=CDS]
Sequence

ATGGGGGGAGTGAGAAAAGGATGGTTGGGGCAAATGGGTTTCAACAAAGGTGGAGGAAAC
ATCAATTGGTTCCCGGGGCACATGGCTGCGGCTACCCGTGCTATTCGCCAACGCCTCAAA
CTCTCTGACCTTGTTATTGAAGTCCGTGATGCCCGTATACCATTGTCTTCGGCGAACGAA
GACTTGCAGCCAATGCTTTCTGGAAAAAGGCGAGTCATAGCCCTCAATAAACAAGATTTG
GCCAACCGCAACCTCATGCATGGGTGGATTAATTATTTTAATTCATGTAAACAAGAGTGT
CTCCCAATAAATGCACACAGTAGAAGTTCTGTACAAAAGCTTCTTGATCTGGTCGAGTTC
AAACTGAAGGAGGTTATGACAAGGGAACCTACTCTTCTTGTCTTGGTGTTGGGTGTTCCG
AATGTTGGCAAATCAGCTTTAATCAACTCCATCCATCAAATTGCATTATCTCGATTTCCA
GTGCAGGAGAAGATGAAGAAGGCTAGAGTGGGGCCTTTGCCTGGTGTAACTCAAGATATT
GCTGGATTCAAGATTGCACATCGACCTAGCGTATATGTGTTGGACACTCCAGGAGTGTTG
GTTCCCAGTATCCCAGATATAGAAACCGGGCTAAAGCTGGCTCTTGCAGGGTCCGTGAAA
GATTCTGTAGTTGGTGAAGAGCGAATTGCTCAATACTTATTAGCAGTGTTAAACACTCGA
GGAACTCCTCTTCATTGGAAGCACTTGGTTAGCAGGGAAAGTGAGGACCTTCACCTTGAG
TTGGACAAGAAACCTGAATCTAATATCAAAGATCTTCAAAATAAGAGCAAGAAGCCCATA
AACAAATCTGATGTCTACCGCGTTCAGGATATGATTAGTGAAGTCCAACGCACACTTTAC
ATCACACACTCGGAGTTCAATGGTAGTTTGGAAGATGAATGCGACCTAGAAACTCTAATA
GACCACCAGTTTGAAGCGTTGCAGAAGGCTCTAAAGATACCTCATAAGGCTTCAGAGGCT
CGGATAATGGTATCAAAGAAATTCCTTACGTTATTTAGAACAGGGAAACTAGGTTCTTTT
ATCCTGGACGACGTTCCTGATGCATCTGACTCTGTATCTTGA

Peptide Sequence

PEP ID

XP_016494318.1
PEP Infomation

PREDICTED: short integuments 2, mitochondrial-like [Nicotiana tabacum]
Sequence

MGGVRKGWLGQMGFNKGGGNINWFPGHMAAATRAIRQRLKLSDLVIEVRDARIPLSSANE
DLQPMLSGKRRVIALNKQDLANRNLMHGWINYFNSCKQECLPINAHSRSSVQKLLDLVEF
KLKEVMTREPTLLVLVLGVPNVGKSALINSIHQIALSRFPVQEKMKKARVGPLPGVTQDI
AGFKIAHRPSVYVLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTR
GTPLHWKHLVSRESEDLHLELDKKPESNIKDLQNKSKKPINKSDVYRVQDMISEVQRTLY
ITHSEFNGSLEDECDLETLIDHQFEALQKALKIPHKASEARIMVSKKFLTLFRTGKLGSF
ILDDVPDASDSVS

Transcript Sequence

Gene sequence data has not been registered.